Compilation failed for package iranges
WebNov 13, 2024 · > install.packages ("ConvCalendar_1.0.tar.gz", repos=NULL, type="source") Installing package into ‘C:/Users/myname/Documents/R/win-library/3.5’ (as ‘lib’ is unspecified) * installing *source* package 'ConvCalendar' ... ** libs *** arch - i386 Warning in system (cmd) : 'make' not found ERROR: compilation failed for package … WebMar 24, 2024 · Attaching package: ‘WGCNA’ The following object is masked from ‘package:IRanges’: cor The following object is masked from ‘package:S4Vectors’: cor The following object is masked from ‘package:stats’: cor Warning message: package ‘WGCNA’ was built under R version 3.6.3
Compilation failed for package iranges
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WebIRanges are collections of integer intervals. GRanges are like IRanges, but with an associated chromosome and strand, taking care of some book keeping. Here we discuss IRanges, which provides the foundation for GRanges. This package implements (amongst other things) an algebra for handling integer intervals. WebJul 24, 2013 · Next message: [BioC] ERROR: compilation failed for package XVector Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] Hi Herve, I did have tested using biocLite() method to install XVector.
WebWoops, meant to expand on the "how would you have known" (that this package is only available in bioc-devel) bit before hitting send. There are two things that would have clued you into that fact: First, on the package page, under the "Details" section, there is a row that says "In Bioconductor since", with a value of "BioC 2.14 (R-3.1)" btw, the current version … WebJul 24, 2013 · Next message: [BioC] ERROR: compilation failed for package XVector Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] On Tue, Jul 23, 2013 at 6:44 …
WebThe package provides efficient low-level and highly reusable S4 classes for storing ranges of integers, RLE vectors (Run-Length Encoding), and, more generally, data that can be organized sequentially (formally defined as Vector objects), as well as views on these Vector objects. Efficient list-like classes are also provided for storing big collections of instances … WebProvides efficient low-level and highly reusable S4 classes for storing, manipulating and aggregating over annotated ranges of integers. Implements an algebra of range …
WebNov 16, 2024 · There seems to be an issue (with both the CRAN and GitHub versions) between static and shared libraries. Any idea how I can fix this? Running R4.0.3 on Ubuntu 20.04.
WebSo you have two choices: 1) Tell R to a) either ask you before installing packages from source, or b) to never install packages from source. For option a) do this before the biocLite () command: options (install.packages.compile.from.source="interactive") Then, when biocLite () asks you whether to install packages from source, say (n)o. holon pyramidWebDec 19, 2024 · ERROR: compilation failed for package ‘gert’ removing ‘/home/yinshan2453/R/x86_64-pc-linux-gnu-library/3.6/gert’ Warning in install.packages : installation of package ‘gert’ had non-zero exit status r-ver:3.5.3 -> debian:stretch r-ver:3.6.3 -> debian:buster r-base:latest -> debian:testing sgraham9319/forestexplorR#29 holo noiseholon seikoWebCitation (from within R, enter citation ("GenomicRanges") ): Installation To install this package, start R (version "4.2") and enter: if (!require ("BiocManager", quietly = TRUE)) install.packages ("BiocManager") BiocManager::install ("GenomicRanges") For older versions of R, please refer to the appropriate Bioconductor release . Documentation holon osWebcompilation failed for package \'IRanges\' @str_utils.c (152) identifier \"timezone\" is undefined. Rcurl now installed in R.2.15.2 but still chocking on IRanges at tzset cc … holon lakeWebJan 6, 2024 · Some kind of error shown below. "No methods found in package ‘IRanges’ for requests: ‘%in%’, ‘elementLengths’, ‘elementMetadata’, ‘ifelse’, ‘queryHits’, ‘Rle’, ‘subjectHits’, ‘t’ when loading ‘bumphunter’ " Then I try to install the packages after downloading it manually. That time also it is showing error. holon museumWebJul 6, 2015 · The error is due to R being unable to find a binary version of the package on CRAN, instead only finding a source version of the package and your Windows installation being unable to compile it. Usually this doesn't occur, but in this case was caused by the (temporary) outage of some of the mirrors at CRAN. If you type: holopai 13